BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C08SP1|AL426007
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1035 1566 0.0
>3x_Contig1035
Length = 4175
Score = 1566 bits (790), Expect = 0.0
Identities = 797/798 (99%), Gaps = 1/798 (0%)
Strand = Plus / Minus
Query: 10 tacgacccaattgccaaattgcaatcttctcaaataagaagatctccaatcaggagtctt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 tacgacccaattgccaaattgcaatcttctcaaataagaagatctccaatcaggagtctt 3458
Query: 70 cgagtcgtgttcaataccaataatcaacccgatttcctttggagacacgttctctgggat 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3457 cgagtcgtgttcaataccaataatcaacccgatttcctttggagacacgttctctgggat 3398
Query: 130 ccaattgggtactggttgcaacagatcagtgtcgacatctgcccagacaccaccacgcgc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3397 ccaattgggtactggttgcaacagatcagtgtcgacatctgcccagacaccaccacgcgc 3338
Query: 190 ca-caagatgaggtacttaaagaaatcgatctttaagatcgacgtaggcaaagaatcata 248
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3337 cagcaagatgaggtacttaaagaaatcgatctttaagatcgacgtaggcaaagaatcata 3278
Query: 249 agcttctatcacttcaggaactgtagcatagaaaccatgcacaaacgccgcagcagtatc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3277 agcttctatcacttcaggaactgtagcatagaaaccatgcacaaacgccgcagcagtatc 3218
Query: 309 gtcgttgacaatctcgtgaacgaaaccagggtttttattagcccagttccgttcgtattt 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3217 gtcgttgacaatctcgtgaacgaaaccagggtttttattagcccagttccgttcgtattt 3158
Query: 369 tttcaatgtaggatccaacctgtcatcgtcatcggaatacggccaactttgccaaacaaa 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3157 tttcaatgtaggatccaacctgtcatcgtcatcggaatacggccaactttgccaaacaaa 3098
Query: 429 agcggggaatctctgagtggtaccgtactcaaacacaacggccaacttctctctcaaagt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3097 agcggggaatctctgagtggtaccgtactcaaacacaacggccaacttctctctcaaagt 3038
Query: 489 cgcatgtctggcaggttgcttcaacgcttgaatcttcttctccaagactttcctctctct 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3037 cgcatgtctggcaggttgcttcaacgcttgaatcttcttctccaagactttcctctctct 2978
Query: 549 atcaaaccttcttgcctgatcgtcctgtttctttagcatatcctggctcaatttctcaaa 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2977 atcaaaccttcttgcctgatcgtcctgtttctttagcatatcctggctcaatttctcaaa 2918
Query: 609 tttctccataattttacggtctgattgctcggaagaacccatattaatctccttaggtaa 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2917 tttctccataattttacggtctgattgctcggaagaacccatattaatctccttaggtaa 2858
Query: 669 attctgtaatagtgtctgcaaatctgcagcagtcgtactgtagttaagcatcttgaaaag 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2857 attctgtaatagtgtctgcaaatctgcagcagtcgtactgtagttaagcatcttgaaaag 2798
Query: 729 aaccaccactgcaaacaccaacggaattgcaatggtggctatccttctccagttatttct 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2797 aaccaccactgcaaacaccaacggaattgcaatggtggctatccttctccagttatttct 2738
Query: 789 cttgcccttggccatctt 806
||||||||||||||||||
Sbjct: 2737 cttgcccttggccatctt 2720
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5567
Number of Sequences: 1807
Number of extensions: 5567
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)